Cryptic genetic variation helps populations adapt to new environments

D-USYS

Using the example of fluorescent proteins, a team of researchers of University of Zurich and ETH Zurich found that cryptic genetic variation facilitates adaptation to new environments.

by D-USYS / ETH Zürich

Cryptic genetic variation is standing genetic variation1 that does not normally affect organismal traits, but that can upon perturbation, such as an environmental change. This is shown in an experimental study by Jia Zhang, and Andreas Wagner of the Institute for Evolutionary Biology and Environmental Studies at the University of Zurich, and Joshua L. Payne, Assistant Professor of Computational Biology of the Institute of Integrative Biology (IBZ) at ETH Zurich. Previous studies have already shown that cryptic genetic variation can facilitate adaptation to new environments, but the underlying molecular mechanisms remained unclear.

The experimental study used evolving populations of fluorescent proteins to show that cryptic genetic variation facilitates adaptation to new environments by providing access to adaptive mutational paths that would be otherwise inaccessible. It does so because it often includes mutations that would be individually detrimental to the organism in the new environment, but that serve as stepping-stones to combinations of mutations that are advantageous in the new environment. The accumulation of such mutations prior to an environmental change therefore renders an evolving population well poised to adapt to new environments.

Cryptic variation helps explore diverse genotypes. Reprinted with permission from J Zheng et al., Science 480:1238 (2019)
Cryptic variation helps explore diverse genotypes. Each circle (node) represents a genotype that has been observed during evolution. An edge connects two genotypes if they differ in a single amino acid. Colored circles represent genotypes that exclusively occur in a single replicate population, where circle area (logarithmic scale) corresponds to genotype frequency. White and gray circles indicate genotypes that were not observed in populations at the evolutionary endpoint or that were observed in at least two replicate populations at the evolutionary endpoint, respectively. Sizes of gray circles correspond to the highest frequencies of the corresponding genotypes in those replicate populations. Dashed ovals circumscribe each labeled high-fluorescence genotype, together with the genotypes composed of subsets of its constituent mutations. Reprinted with permission from J Zhang et al., Science (2019)

1 Standing genetic variation: the presence of more than one allele at a locus in a population. An allele is a variant form of a given gene.

JavaScript has been disabled in your browser